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Metadatabase view - dataset: Multilocus BOLD Dataset for Nearctic Polycentropodidae (Trichoptera)

General information

dataset entry ID:
FWM_31
name of the dataset:
full name of the dataset:
Multilocus BOLD Dataset for Nearctic Polycentropodidae (Trichoptera)
dataset short name:
DS-POLYCSS Nearctic Polycentropodidae
type of dataset (more information):
others
specify:
Molecular data with voucher collection data
data type:
descriptive data
short description of the dataset/summary:
The BOLD dataset "DS-POLYCSS Nearctic Polycentropodidae (Trichoptera)" contains publicly accessible molecular data and associated voucher collection data. Data include two loci (nuclear 28s rRNA D2 and mitochondrial cytochrome oxidase C (COI)), specimen images, collection data, and additional specimen data. Data pertain to hundreds of treated specimens and dozens of treated species, of different life stages and both sexes, of the Trichoptera family Polycentropodidae in the Nearctic, with an emphasis on Polycentropus sensu lato. Data will continued to be added during continued systematic studies of the family by the authors.
keywords according to GCMD:
topic:
Biosphere, Biological Classification
ISO topic category according to ISO 19115:
Biota, Inland Waters
INSPIRE keywords according to GEMET:
Species distribution
own science keywords:
aquatic insects, Annulipalpia, biodiversity, DNA barcoding, phylogeny, taxonomy, Trichoptera
related project:
BOLD ORFIN - Nearctic Polycentropus sensu lato (Trichoptera: Polycentropodidae)
funding:
This work was supported by the McIntire-Stennis Program from the USDA National Institute of Food and Agriculture and by the USDA National Institute of Food and Agriculture, 1890 Institution Capacity Building Grant Project 1021805.

Technical and administrative specifications

data format:
others/specify
others/details:
Barcode of Life Database
operating system:
all operating systems
English
current access level:
web (public)
http://www.boldsystems.org/index.php/Public_SearchTerms?query=DS-POLYCSS
currently available through GBIF:
no
exchange planned:
no
data in data repository:
yes
specify repository:
BARCODE OF LIFE DATA SYSTEM v4
Do you plan to publish the data on the Freshwater Biodiversity Data Portal:
no
update level:
continuously updated, update planned
contact details:
metadata contact person:
first, last name:
Alexander
 
Orfinger
phone:
3862902505
email:
a.orfinger@ufl.edu
institution:
University of Florida / Florida A&M University
address:
113 Perry-Paige S
postal code, city:
32307
 
Tallahassee
Florida
country:
United States
technical contact person:
Alexander
 
Orfinger
3862902505
a.orfinger@ufl.edu
scientific contact person:
first, last name:
Alexander
 
Orfinger
phone:
3862902505
email:
a.orfinger@ufl.edu

Intellectual property rights and citation

BARCODE OF LIFE DATA SYSTEM v4 (BOLD)
dataset creator (data compiler):
contact name:
Alexander Orfinger
contact email:
a.orfinger@ufl.edu
contact institution:
University of Florida / Florida A&M University
data contributors to/owners of this dataset:
multiple
number:
3
data contributor/owner 1
contact name:
Alexander Orfinger
contact orcid:
0000-0002-4907-3150
contact position:

contact email:
a.orfinger@ufl.edu
contact institute:
University of Florida / Florida A&M University
contact country:
United States
criteria for using this part of the dataset:
The dataset is publicly available (data portal, data archive) and can be used without restrictions, but dataset creator/data contributors must be informed prior to publication. Data must be acknowledged and cited correctly.

data contributor/owner 2
contact name:
Andrew Rasmussen
contact orcid:
N/A
contact position:

contact email:
andrew.rasmussen@famu.edu
contact institute:
Florida A&M University
contact country:
United States
criteria for using this part of the dataset:
The dataset is publicly available (data portal, data archive) and can be used without restrictions, but dataset creator/data contributors must be informed prior to publication. Data must be acknowledged and cited correctly.

data contributor/owner 3
contact name:
Raymond Hix
contact orcid:
N/A
contact position:

contact email:
raymond.hix@famu.edu
contact institute:
Florida A&M University
contact country:
United States
criteria for using this part of the dataset:
The dataset is publicly available (data portal, data archive) and can be used without restrictions, but dataset creator/data contributors must be informed prior to publication. Data must be acknowledged and cited correctly.

citation of this dataset:
author(s):
Orfinger, A.B., Rasmussen, A.K. & Hix, R.L.
title and journal (name, number, pages):
Dataset - DS-POLYCSS Nearctic Polycentropodidae (Trichoptera), BARCODE OF LIFE DATA SYSTEM v4, 2021, accessible at http://www.boldsystems.org/index.php/Public_SearchTerms?query=DS-POLYCSS
year:
2021
doi (if applicable):
https://doi.org/10.5883/DS-POLYCSS
citation of the metadata:
author(s):
Orfinger, A.B., Rasmussen, A.K. & Hix, R.L.
title and journal (name, number, pages):
Multilocus BOLD Dataset for Nearctic Polycentropodidae (Trichoptera): Metadata. Freshwater Metadata Journal 51: 1-6
year:
2021
doi (if applicable):
https://doi.org/10.15504/fmj.2021.51

General data specifications

regional coverage of the dataset:
spatial extent of the dataset:
global
continents:
Africa, North America, South America, Asia, Europe, Oceania
countries:
Africa: Algeria, Angola, Benin, Botswana, Burkina Faso, Burundi, Cameroon, Cape Verde, Central African Republic, Chad, Comoros, Democratic Republic of Congo, Republic of Congo, Côte d'Ivoire, Djibouti, Egypt, Equatorial Guinea, Eritrea, Ethiopia, Gabon, Gambia, Ghana, Guinea, Guinea-Bissau, Kenya, Lesotho, Liberia, Libya, Madagascar, Malawi, Mali, Mauritania, Mauritius, Mayotte, Morocco, Mozambique, Namibia, Niger, Nigeria, Réunion, Rwanda, Saint Helena, Sao Tome and Principe, Senegal, Seychelles, Sierra Leone, Somalia, South Africa, Sudan, Swaziland, Tanzania, Togo, Tunisia, Uganda, Western Sahara, Zambia, Zimbabwe, Somaliland
North America: Anguilla, Antigua and Barbuda, Aruba, Bahamas, Barbados, Belize, Bermuda, British Virgin Islands, Canada, Cayman Islands, Clipperton Island, Costa Rica, Cuba, Dominica, Dominican Republic, El Salvador, Greenland, Grenada, Guadeloupe, Guatemala, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Navassa Island, Netherlands Antilles, Nicaragua, Panama, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin, Saint Pierre and Miquelon, Saint Vincent and the Grenadines, Trinidad and Tobago, Turks and Caicos Islands, United States, United States Virgin Islands
South America: Argentina, Bolivia, Brazil, Chile, Colombia, Ecuador, Falkland Islands, French Guiana, Guyana, Paraguay, Peru, Suriname, Uruguay, Venezuela
Asia: Afghanistan, Armenia, Azerbaijan, Bahrain, Bangladesh, Bhutan, British Indian Ocean Territory, Brunei, Cambodia, China, Christmas Island, Cocos (Keeling) Islands, Cyprus, Georgia, Hong Kong, India, Indonesia, Iran, Iraq, Israel, Japan, Jordan, Kazakhstan, Democratic People's Republic of Korea, Republic of Korea, Kuwait, Kyrgyzstan, Laos, Lebanon, Macau, Malaysia, Maldives, Mongolia, Myanmar (Burma), Nepal, Oman, Pakistan, Palestinian territories, Philippines, Qatar, Saudi Arabia, Singapore, Sri Lanka, Syria, Tajikistan, Thailand, Timor-Leste (East Timor), Turkey, Turkmenistan, United Arab Emirates, Uzbekistan, Vietnam, Yemen, Abkhazia, Taiwan, Nagorno-Karabakh, Northern Cyprus, South Ossetia
Europe: Åland Islands, Albania, Andorra, Austria, Belarus, Belgium, Bosnia and Herzegovina, Bulgaria, Croatia, Czech Republic, Denmark, Estonia, Faroe Islands, Finland, France, Germany, Gibraltar, Greece, Guernsey, Hungary, Iceland, Ireland, Isle of Man, Italy, Jersey, Latvia, Liechtenstein, Lithuania, Luxembourg, Macedonia, Malta, Moldova, Monaco, Montenegro, Netherlands, Norway, Poland, Portugal, Romania, Russia, San Marino, Serbia, Slovakia, Slovenia, Spain, Svalbard, Sweden, Switzerland, Ukraine, United Kingdom, Vatican City, Kosovo, Pridnestrovie (Transnistria)
Oceania: Australia, Fiji, Kiribati, Marshall Islands, Micronesia, Nauru, New Zealand, Palau, Papua New Guinea, Samoa, Solomon Islands, Tonga, Tuvalu, Vanuatu
world climatic regions according to Köppen:
Group A: tropical/megathermal climates
Group B: dry (arid and semiarid) climates
Group C: temperate/mesothermal climates
Group D: continental/microthermal climate
freshwater ecoregions of the world (FEOW) according to WWF:
 
Africa:
Albertine Highlands, Amatolo - Winterberg Highlands, Ashanti, Bangweulu - Mweru, Bight Drainages, Cape Fold, Coastal East Africa, Comoros - Mayotte, Cuanza, Cuvette Centrale, Drakensberg - Maloti Highlands, Dry Sahel, Eastern Zimbabwe Highlands, Eburneo, Ethiopian Highlands, Etosha, Fouta - Djalon, Horn of Africa, Inner Niger Delta, Kafue, Kalahari, Karoo, Karstveld Sink Holes, Kasai, Lake Chad, Lake Malawi, Lake Rukwa, Lake Tana, Lake Tanganyika, Lake Turkana, Lake Victoria Basin, Lower Congo, Lower Congo Rapids, Lower Niger - Benue, Lower Nile, Lower Zambezi, Madagascar Eastern Highlands, Madagascar Eastern Lowlands, Mai Ndombe, Malagarasi - Moyowosi, Malebo Pool, Mascarenes, Mediterranean Northwest Africa, Middle Zambezi - Luangwa, Mount Nimba, Mulanje, Namib, Niger Delta, Nile Delta, Northern Eastern Rift, Northern Gulf of Guinea Drainages, Northern Upper Guinea, Northwestern Madagascar, Ogooue - Nyanga - Kouilou - Niari, Okavango, Pangani, S. Tome & Principe - Annobon, Sahara, Sangha, Senegal - Gambia, Seychelles, Shebelle - Juba, Southern Eastern Rift, Southern Gulf of Guinea Drainages - Bioko, Southern Kalahari, Southern Madagascar, Southern Temperate Highveld, Southern Upper Guinea, Sudanic Congo - Oubangi, Tana, Athi & Coastal Drainages, Tumba, Uele, Upper Congo, Upper Congo Rapids, Upper Lualaba, Upper Niger, Upper Nile, Upper Zambezi Floodplains, Volta, Western Equatorial Crater Lakes, Western Madagascar, Western Orange, Western Red Sea Drainages, Zambezian Headwaters, Zambezian Highveld, Zambezian Lowveld
 
North America:
Alaska & Canada Pacific Coastal, Alaskan Coastal, Ameca - Manantlan, Apalachicola, Appalachian Piedmont, Bahama Archipelago, Bermuda, Bonneville, Canadian Arctic Archipelago, Canadian Atlantic Islands, Central Arctic Coastal, Central Prairie, Chagres, Chesapeake Bay, Chiapas - Fonseca, Chiriqui, Coatzacoalcos, Cocos Island (Costa Rica), Colorado, Columbia Glaciated, Columbia Unglaciated, Cuatro Cienegas, Cuba - Cayman Islands, Cumberland, Death Valley, East Texas Gulf, Eastern Hudson Bay - Ungava, English - Winnipeg Lakes, Estero Real - Tempisque, Florida Peninsula, Gila, Grijalva - Usumacinta, Gulf of St.Lawrence Coastal Drainages, Guzman - Samalayuca, Hispaniola, Isthmus Caribbean, Jamaica, Lahontan, Laurentian Great Lakes, Lerma - Chapala, Llanos El Salado, Lower Mackenzie, Lower Mississippi, Lower Rio Grande - Bravo, Mayran - Viesca, Middle Missouri, Middle Saskatchewan, Mobile Bay, Mosquitia, Northeast US & Southeast Canada Atlantic Drainages, Oregon & Northern California Coastal, Oregon Lakes, Ouachita Highlands, Ozark Highlands, Panuco, Papaloapan, Pecos, Puerto Rico - Virgin Islands, Quintana Roo - Motagua, Rio Balsas, Rio Conchos, Rio Salado, Rio San Juan (Mexico), Rio Santiago, Rio Tuira, Sabine - Galveston, Sacramento - San Joaquin, San Juan (Nicaragua/Costa Rica), Santa Maria, Scotia - Fundy, Sierra Madre del Sur, Sinaloa, Sonora, Southern California Coastal - Baja California, Southern Hudson Bay, St.Lawrence, Teays - Old Ohio, Tennessee, Upper Mackenzie, Upper Mississippi, Upper Missouri, Upper Rio Grande - Bravo, Upper Saskatchewan, Upper Snake, Upper Usumacinta, Upper Yukon, US Southern Plains, Vegas - Virgin, West Florida Gulf, West Texas Gulf, Western Hudson Bay, Windward & Leeward Islands, Yucatan
 
South America:
Amazonas Estuary & Coastal Drainages, Amazonas Guiana Shield, Amazonas High Andes, Amazonas Lowlands, Atacama, Bonaerensean Drainages, Central Andean Pacific Slopes, Chaco, Cuyan - Desaguadero, Essequibo, Fluminense, Galapagos Islands, Guapore - Itenez, Guianas, Iguassu, Juan Fernandez Island, Laguna dos Patos, Lower Parana, Lower Uruguay, Madeira Brazilian Shield, Magdalena - Sinu, Mamore - Madre de Dios Piedmont, Mar Chiquita - Salinas Grandes, Maracaibo, North Andean Pacific Slopes - Rio Atrato, Northeastern Caatinga & Coastal Drainages, Northeastern Mata Atlantica, Orinoco Delta & Coastal Drainages, Orinoco Guiana Shield, Orinoco High Andes, Orinoco Llanos, Orinoco Piedmont, Paraguay, Paraiba do Sul, Parnaiba, Patagonia, Ribeira de Iguape, Rio Negro, S. Francisco, South America Caribbean Drainages - Trinidad, South Andean Pacific Slopes, Southeastern Mata Atlantica, Tapajos - Juruena, Titicaca, Tocantins - Araguaia, Tramandai - Mampituba, Ucayali - Urubamba Piedmont, Upper Parana, Upper Uruguay, Valdivian Lakes, Western Amazon Piedmont, Xingu
 
Asia:
Aceh, Anadyr, Andaman Islands, Aral Sea Drainages, Argun, Balkash - Alakul, Baluchistan, Biwa Ko, Borneo Highlands, Central & Eastern Java, Chao Phraya, Chin Hills - Arakan Coast, Chuya, Coastal Amur, Coastal Fujian - Zeijang, Dzungaria, East Chukotka, Eastern Borneo, Eastern Gulf of Thailand Drainages, Eastern Taiwan, Eastern Yellow Sea Drainages, Er Hai, Ganges Delta & Plain, Ganges Himalayan Foothills, Hainan, Hamgyong - Sanmaek, Helmand - Sistan, Honshu - Shikoku - Kyushu, Huang He Great Bend, Indian Ocean Slope of Sumatra & Java, Indus Himalayan Foothills, Inle Lake, Inner Mongolia Endorheic Basins, Irgyz -Turgai, Kamchatka & Northern Kurils, Kapuas, Khorat Plateau (Mekong), Kolyma, Koryakia, Kratie - Stung Treng (Mekong), Lake Baikal, Lake Issyk Kul - Upper Chu, Lake Lanao, Lake Poso, Lena, Lesser Sunda Islands, Liao He, Lower & Middle Indus, Lower & Middle Salween, Lower & Middle Syr Darya, Lower Amur, Lower Huang He, Lower Lancang (Mekong), Lower Yangtze, Mae Khlong, Malay Peninsula Eastern Slope, Malili Lakes, Malukku, Mekong Delta, Middle Amu Darya, Middle Amur, Middle Brahmaputra, Middle Yangtze, Mindanao, Namuda - Tapi, Nicobar Islands, Northeastern Borneo, Northern Annam, Northern Central Asian Highlands, Northern Central Sumatra - Western Malaysia, Northern Deccan Plateau, Northern Philippine Islands, Northwestern Borneo, Ob, Okhotsk Coast, Palawan - Busuanga - Mindoro, Qaidan, Sakhalin, Hokkaido, & Sikhote - Alin Coast, Shilka (Amur), Sitang - Irawaddy, Song Hong, Songhua Jiang, Southeastern Borneo, Southeastern Ghats, Southeastern Korean Peninsula, Southern Annam, Southern Central Sumatra, Southern Deccan Plateau, Southern Sumatra - Western Java, Sri Lanka Dry Zone, Sri Lanka Wet Zone, Sulawesi, Taimyr, Tarim, Tibetan Plateau Endorheic Drainages, Upper Amu Darya, Upper Brahmaputra, Upper Huang He, Upper Huang He Corridor, Upper Indus, Upper Irtysh, Upper Lancang (Mekong), Upper Salween, Upper Yangtze, Western Ghats, Western Mongolia, Western Taiwan, Xi Yiang, Yaghistan, Yenisei, Yunnan Lakes
 
Europe:
Aegean Drainages, Arabian Interior, Atlantic Northwest Africa, Barents Sea Drainages, Cantabric Coast - Languedoc, Caspian Highlands, Caspian Marine, Central & Western Europe, Central Anatolia, Coastal Levant, Crimea Peninsula, Dalmatia, Dnieper - South Bug, Dniester - Lower Danube, Don, Eastern Iberia, Esfahan, Gulf of Venice Drainages, Iceland - Jan Mayen, Ionian Drainages, Italian Peninsula & Islands, Jordan River, Kavir & Lut Deserts, Kuban, Kura - South Caspian Drainages, Lake Onega - Lake Ladoga, Lake Van, Lower Tigris & Euphrates, Namak, Northern Anatolia, Northern Baltic Drainages, Northern British Isles, Northern Hormuz Drainages, Norwegian Sea Drainages, Oman Mountains, Orontes, Orumiyeh, Sinai, Southeastern Adriatic Drainages, Southern Anatolia, Southern Baltic Lowlands, Southern Iberia, Southwestern Arabian Coast, Thrace, Turan Plain, Upper Danube, Upper Tigris & Euphrates, Vardar, Volga - Ural, Volga Delta - Northern Caspian Drainages, Western Anatolia, Western Caspian Drainages, Western Iberia, Western Transcaucasia
 
Oceania:
Eastern Coastal Australia, Southwestern Australia
European ecoregions according to Illies (WFD):
Iberic-Macaronesian Region (ER1), Pyrenees (ER2), Italy, Corsica and Malta (ER3), Alps (ER4), Dinaric Western Balkan (ER5), Hellenic Western Balkan (ER6), Eastern Balkan (ER7), Western Highlands (ER8), Central Highlands (ER9), The Carpathians (ER10), Hungarian Lowlands (ER11), Pontic Province (ER12), Western Plains (ER13), Central Plains (ER14), Baltic Province (ER15), Eastern Plains (ER16), Ireland and Northern Ireland (ER17), Great Britain (ER18), Iceland (ER19), Borealic Uplands (ER20), Tundra (ER21), Fenno-Scandian Shield (ER22), Taiga (ER23), The Caucasus (ER24), Caspic Depression (ER25), North Africa (ERX), Middle East (ERY)
ecosystem type:
rivers, lakes/ponds, wetlands, groundwater, general freshwater, coastal areas
year from
2000
 

Site specifications

coordinate system/grid data:
 

Climate and environmental data

climate related data:
no climate data available
environmental data:
no environmental data per catchment available
no environmental data per site avaiable
available parameters per site:
information on riparian vegetation (incl. information on modification)
available parameters per site:
information on embankment (incl. information on modification)
available parameters per site:
information on channel form (incl. information on modification)
available parameters per site:
information on water uses (e.g., irrigation, fish ponds)
available parameters per site:
distance to the next main village/town upstream
available parameters per site:
stream order (according to Strahler)
available parameters per site:
altitude
available parameters per site:
information on instream habitat (incl. information on modification)
physico-chemical data:
no physico-chemical data available

Biological data

biological data origin:
specify project:
specify method:
organism group addressed:

Sample specifications/sample resolution

Other specifications

GIS layers, shape files related to the dataset:
no data available
availability of photos:
yes
availability of maps:
yes
quality control procedures:
Were any quality control procedures applied to your dataset?
yes
quality control protocols and comments:
Standard BOLD quality assurance procedures.
reference(s):
http://www.boldsystems.org/libhtml_v3/static/BOLD4_Documentation_Draft1.pdf
Querytime: 1.18384 sec